Zinc finger, AN1 and A20 type
Description
| PFAM: | The AN1-type zinc finger domain has a dimetal (zinc)-bound alpha/beta fold. Certain stress-associated proteins contain the AN1 domain, often in combination with A20 zinc finger domains or C2H2 domains. |
References:
| 1) | Lang, D; Weiche, B; Timmerhaus, G; Richardt, S; Riano-Pachon, DM; Correa, LG; Reski, R; Mueller-Roeber, B; Rensing, SA. 2010. Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity. Genome Biol Evol. 2: 488-503 PubMed |
| 2) | Vij, S; Tyagi, AK. 2006. Genome-wide analysis of the stress associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis. Mol Genet Genomics 276(6):565-75 PubMed |
Summary
| Name: | Zinc finger, AN1 and A20 type |
|---|---|
| Class: | TR |
| Number of species containing the TAP: | 123 |
| Number of available proteins: | 1311 |
The colour code corresponds to the rules for the domains:
should be contained
should not be contained
should not be contained
Domain rules:
(Domain names are clickable)
Phylogenetic tree for Archeaplastida:
No tree was calculated yet.
TAP distribution:
The following table shows the distribution of Zinc finger, AN1 and A20 type over all species included in TAPscan. The values for e.g. a specific kingdom are shown in the tree below if you expand the tree for that kingdom.
| Minimum | Maximum | Average | Median | Standard deviation |
|---|---|---|---|---|
| 0 | 36 | 10.85 | 10 | 7.83 |